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Starred repositories

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Gas Town - multi-agent workspace manager

Go 748 70 Updated Jan 3, 2026

Harness the scientific methods of Sydney Brenner using AI Agents

TypeScript 27 3 Updated Jan 2, 2026
Python 34 5 Updated Dec 30, 2025

Standalone front-end parser for Quarto Markdown. NOT READY FOR PRODUCTION USE

C 28 2 Updated Dec 17, 2025

Structured Markdown documents for agents and humans

TypeScript 19 1 Updated Jan 3, 2026

protein folding app running on modal

Python 17 4 Updated Dec 26, 2025

High performance embedded vector database

Rust 143 11 Updated Dec 28, 2025

Generative UI SDK for React

TypeScript 1,780 127 Updated Jan 3, 2026
Rust 11 Updated Dec 18, 2025

Encode and decode biological codes efficiently

Rust 10 Updated Dec 24, 2025

Official repository of PXDesign

Python 123 15 Updated Dec 31, 2025

Patchwork: an experimental AI programming language

Rust 3 Updated Dec 10, 2025

An experiment Rust variant of patchwork.

Rust 3 Updated Dec 19, 2025
TypeScript 8,934 615 Updated Jan 3, 2026

Fast, parallel Rust implementation of Prodigal for prokaryotic gene prediction in microbial genomes

Rust 20 Updated Dec 7, 2025

Rust implementation of ntHash rolling‑hash suite, focused on contiguous k‑mer hashing for DNA sequences.

Rust 7 1 Updated Aug 5, 2025

The chat interface of Amazon Q Developer (for IDEs)

TypeScript 37 50 Updated Nov 17, 2025
Jupyter Notebook 71 7 Updated Dec 15, 2025

composite-objective protein design

Python 131 16 Updated Dec 11, 2025
Rust 18 1 Updated Dec 9, 2025

Wassette: A security-oriented runtime that runs WebAssembly Components via MCP

Rust 798 54 Updated Dec 29, 2025

Agent Builder and Runtime by Docker Engineering

Go 1,800 207 Updated Jan 2, 2026

cz-benchmarks is a package for standardized evaluation and comparison of machine learning models for biological applications.

Python 45 7 Updated Dec 19, 2025

A powerful coding agent toolkit providing semantic retrieval and editing capabilities (MCP server & other integrations)

Python 18,020 1,237 Updated Jan 3, 2026

Masgent: Materials Simulation Agent

Python 25 3 Updated Jan 3, 2026

A small Rust library + binary that serves pre-built OpenAI-API compatible Chat UI

Rust 5 2 Updated Dec 31, 2025

Oxford Deep NLP 2017 course

15,864 3,581 Updated Jul 2, 2023

A comprehensive Dioxus component library with CSS modules via stylance

Rust 8 Updated Dec 4, 2025

Ultra-rapid detection of viral variants directly from sequencing data

Rust 27 Updated Dec 15, 2025
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