EricSDavis
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Lists (8)
Applications
Open source applications that I've developed or contributed to.Bioinformatic Pipelines
Interactive Data Visualization
Just for fun
Fun projects!.NET Core
Projects
Phanstiel lab research projects.R/Bioconductor Packages
Software packages for R/Bioconductor that I've developed or contributed to.Workshops
Workshops and presentation materials and source code.Stars
Single-cell RNA-seq Analysis of Metastatic Melanoma Tumors
Snakemake pipeline for processing MicroC data following guidelines from Dovetail Genomics (https://micro-c.readthedocs.io/en/latest/index.html).
Text-based version of the mantis card game (https://www.explodingkittens.com/pages/how-to-play-mantis)
An R package with a collection of useful tools for Hi-C data analysis.
EricSDavis / straw
Forked from aidenlab/strawExtract data quickly from Juicebox via straw
BCB student seminar presentation on mariner progress.
EricSDavis / bagPipes
Forked from PhanstielLab/bagPipesNew and improved snakemake pipelines for RNA-seq, ChIP-seq, and ATAC-seq processing for the Phanstiel Lab
dietJuicer is a lighter-weight, HPC flexible version of juicer written with snakemake