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Enhancer-Promoter Time-course Analysis (EPTA)

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Enhancer-Promoter Time-course Analysis (EPTA)

EPTA (Enhancer-Promoter Time-course Analysis) aims to investigate the time-relationship between enhancer-promoter interactions. Using what we learn from time-courses, we hope to 1) build a model to predict enhancer-promoter connections from time-course data and 2) validate our model's predictions with experimental techniques, such as perturb-seq.

Datasets

  1. MOMA (monocyte/macrophage differentiation data)
  2. LIMA (LPS-Induced Machrophage Activation)
  3. TBD...

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