Simple Python script for deskewing Lattice Light Sheet Data
conda install -c conda-forge pycudadecon
pip install tifffile
Ref: pycudadecon : https://github.com/tlambert03/pycudadecon/
python deskew.py [DIR] [OPTIONS]
positional arguments:
input_dir
optional arguments:
-h, --help show this help message and exit
-v, --version show program's version number and exit
-ag [ANGLE], --angle [ANGLE]
-dx [XPIXEL], --xpixel [XPIXEL]
-dz [ZPIXEL], --zpixel [ZPIXEL]