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ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to allow a continuous, easy, and controlled comparison of prot…

Jupyter Notebook 50 22 Updated Jan 15, 2026
Jupyter Notebook 2 Updated Oct 24, 2025

Collisional cross-section prediction for modified and multiconformational peptides

Python 13 2 Updated Jan 14, 2026

Proteomics search & quantification so fast that it feels like magic

Rust 267 58 Updated Jan 6, 2026