RNA Bioinformatics and High-Throughput Analysis Jena
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viralclust
viralclust PublicSmall pipeline to cluster viral genomes based on their k-mer content. WiP
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- SweetSynteny Public
rnajena/SweetSyntenyâs past year of commit activity - diffMONT Public
diffMONT is a python-based tool for predicting methylation-specific PCR (MSP) primers, based on Nanopore sequencing data. Given mutliple bedmethyl files, diffMONT detects methylation specific PCR primer regions, which can distinguish between two groups of samples (originally cancer patients vs. healthy controls).
rnajena/diffMONTâs past year of commit activity - DnaFeaturesViewerLite Public Forked from Edinburgh-Genome-Foundry/DnaFeaturesViewer
đď¸ Python library to plot DNA sequence features (e.g. from Genbank files) -- lite version
rnajena/DnaFeaturesViewerLiteâs past year of commit activity - dynamont Public
rnajena/dynamontâs past year of commit activity - AssayBLAST Public
rnajena/AssayBLASTâs past year of commit activity - RNAswarm Public
RNAswarm is a nextflow pipeline for differential RNA-RNA interaction analysis using RNA cross-linking methodologies
rnajena/RNAswarmâs past year of commit activity - bayhunter Public
BayHunter: A Bayesian approach to inferring the differential expression of small RNAs from read counts
rnajena/bayhunterâs past year of commit activity
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