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@reichlab The Reich Lab at UMass-Amherst

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    145 repositories

    • reichlab.github.io

      Public
      The website for the Reich Lab @ UMass-Amherst.
      HTML
      •
      Apache License 2.0
      •48•17•6•0•Updated Jan 27, 2026Jan 27, 2026

    • forecast-sandbox-2025-2026-dashboard

      Public
      Dashboard repo for 2025/2026 forecast sandbox
      Creative Commons Zero v1.0 Universal
      •0•0•0•1•Updated Jan 26, 2026Jan 26, 2026

    • sismid-ili-forecasting-dashboard

      Public
      The dashboard repo for SISMID ILI forecasting project
      Creative Commons Zero v1.0 Universal
      •0•0•0•1•Updated Jan 26, 2026Jan 26, 2026

    • covidhub-dashboard

      Public
      Dashboard for the CDC's COVID-19 Forecast Hub
      Creative Commons Zero v1.0 Universal
      •1•1•0•1•Updated Jan 26, 2026Jan 26, 2026

    • flusight-dashboard

      Public
      Dashboard for CDC's FluSight prediction exercise.
      Creative Commons Zero v1.0 Universal
      •4•1•0•1•Updated Jan 26, 2026Jan 26, 2026

    • variant-nowcast-hub

      Public
      A repository to store COVID-19 variant nowcasts collected as a modeling hub.
      R
      •
      MIT License
      •15•20•3•0•Updated Jan 26, 2026Jan 26, 2026

    • cladetime

      Public
      Python interface for accessing Nextstrain SARS-CoV-2 sequence and clade data
      Python
      •
      MIT License
      •2•6•8•3•Updated Jan 26, 2026Jan 26, 2026

    • flusight-dashboard-staging

      Public
      Staging version of flusight-dashboard -- used to demo updates
      Creative Commons Zero v1.0 Universal
      •4•0•0•0•Updated Jan 22, 2026Jan 22, 2026

    • metrocast-dashboard

      Public
      Dashboard website for the epiENGAGE Flu Metrocast Hub.
      Creative Commons Zero v1.0 Universal
      •3•1•1•1•Updated Jan 22, 2026Jan 22, 2026

    • flu-metrocast

      Public
      Short-term forecasts for influenza at the city- and county-level
      R
      •
      MIT License
      •12•9•4•0•Updated Jan 22, 2026Jan 22, 2026

    • variant-nowcast-hub-dashboard

      Public
      Dashboard pages and analyses for the US SARS-CoV-2 Variant Nowcast Hub
      HTML
      •
      Creative Commons Zero v1.0 Universal
      •0•1•18•0•Updated Jan 22, 2026Jan 22, 2026

    • FluSight-forecast-hub

      Public
      FluSight-forecast-hub fork for cloud onboarding
      HTML
      •
      MIT License
      •102•0•0•0•Updated Jan 22, 2026Jan 22, 2026

    • cdcgov-covid19-forecast-hub

      Public
      A repository run by the US CDC to collect forecasts of weekly incident COVID-19 hospital admissions.
      R
      •
      Apache License 2.0
      •30•0•0•0•Updated Jan 21, 2026Jan 21, 2026

    • iddata

      Public
      Python module for accessing infectious disease data
      Python
      •
      MIT License
      •0•1•6•0•Updated Jan 15, 2026Jan 15, 2026

    • predtimechart

      Public
      JavaScript
      •
      MIT License
      •1•1•22•0•Updated Jan 15, 2026Jan 15, 2026

    • forecast-sandbox-2025-2026

      Public
      Sandbox for models and forecasts for the 2025/2026 forecasting season
      Python
      •
      MIT License
      •1•1•1•1•Updated Jan 15, 2026Jan 15, 2026

    • operational-models

      Public
      Repository for automating runs of operational disease forecasting models.
      R
      •
      MIT License
      •1•1•3•0•Updated Jan 14, 2026Jan 14, 2026

    • idmodels

      Public
      Infectious disease models in Python
      Python
      •
      MIT License
      •0•4•2•1•Updated Jan 7, 2026Jan 7, 2026

    • variant-nowcast-model-dev-retro

      Public
      Retrospective model dev for UMass models for variant-nowcast-hub
      R
      •
      MIT License
      •0•2•3•2•Updated Dec 22, 2025Dec 22, 2025

    • sarix

      Public
      Seasonal Auto-Regressive Integrated models with eXogenous predictors
      Jupyter Notebook
      •
      MIT License
      •2•1•2•1•Updated Nov 17, 2025Nov 17, 2025

    • malaria-serology

      Public
      R
      •0•0•0•0•Updated Nov 7, 2025Nov 7, 2025

    • variant-scoring

      Public
      Code and vignettes around scoring variant nowcasts derived from the SARS-CoV-2 Variant Nowcast Hub.
      HTML
      •0•0•0•1•Updated Oct 30, 2025Oct 30, 2025

    • reporule

      Public
      CLI for standardizing repo rulesets for a GitHub org or user
      Python
      •
      MIT License
      •0•2•0•5•Updated Oct 27, 2025Oct 27, 2025

    • decisions

      Public
      A public record of decisions made for lab projects
      HTML
      •
      The Unlicense
      •0•1•1•0•Updated Oct 15, 2025Oct 15, 2025

    • rsv-forecast-hub

      Public
      A repository run by the Centers for Disease Control and Prevention (CDC) to collect forecasts of weekly incident respiratory syncytial virus (RSV) hospitalizations.
      Apache License 2.0
      •9•0•0•0•Updated Sep 9, 2025Sep 9, 2025

    • covid19-forecast-hub-web-1

      Public
      Source for the COVID 19 forecast hub website
      HTML
      •
      Other
      •11•0•0•0•Updated Jul 24, 2025Jul 24, 2025

    • sismid-ili-forecasting-sandbox

      Public
      A hubverse-style repository for collecting forecasts of influenza-like illness
      R
      •
      MIT License
      •18•0•0•2•Updated Jul 21, 2025Jul 21, 2025

    • FluSight-ILI-template-dashboard

      Public template
      A template dashboard repo to support the FluSight ILI sandbox hub
      Creative Commons Zero v1.0 Universal
      •0•0•0•0•Updated Jul 12, 2025Jul 12, 2025

    • FluSight-ILI-template-hub

      Public template
      Template repository containing a subset of FluSight ILI forecasts and target data, set up in the hubverse format. Can be cloned for usage as a sandbox hub that accepts retrospective forecasts for any of the provided seasons.
      R
      •
      MIT License
      •0•0•2•0•Updated Jul 12, 2025Jul 12, 2025

    • predictability

      Public
      MIT License
      •0•1•0•1•Updated Jun 20, 2025Jun 20, 2025