Cost aware hyperparameter tuning algorithm

Anki is a smart spaced repetition flashcard program

Thermodynamic Hypergraphical Model Library in JAX

composite-objective protein design

Flash-Muon: An Efficient Implementation of Muon Optimizer

🧱 Modula software package

You like pytorch? You like micrograd? You love tinygrad! ❤️

A PyTorch library for implementing flow matching algorithms, featuring continuous and discrete flow matching implementations. It includes practical examples for both text and image modalities.

Official repository for the Boltz biomolecular interaction models

👽 Out-of-Distribution Detection with PyTorch

An extremely fast Python package and project manager, written in Rust.

Open-source framework for uncertainty and deep learning models in PyTorch 🌱

Rust port of Spice, a low-overhead parallelization library

rust-sasa-python is a Python library for computing Solvent Accessible Surface Area (SASA/ASA) values for proteins

The Abstraction and Reasoning Corpus

ATOM3D: tasks on molecules in three dimensions

Official repository for the paper "Grokfast: Accelerated Grokking by Amplifying Slow Gradients"

Create a docker image for running ESMFold, solved conflicts between ESMFold and OpenFold dependencies

Compressing protein structures effectively with torsion angles

Protein Graph Library

Biological foundation modeling from molecular to genome scale

Vina-GPU 2.1, an improved docking toolkit for faster speed and higher accuracy on the virtual screening

SIMD-accelerated library for computing global and X-drop affine gap penalty sequence-to-sequence or sequence-to-profile alignments using an adaptive block-based algorithm.

A massively parallel, high-level programming language

Better Data Splits for Machine Learning