This repository,
allocativeharm, contains
reproducible code for our manuscript,
Mitigating allocative tradeoffs and harms in an environmental justice data tool.
All code can be found in the ./code directory and must be run in order
(numerically and alphabetically). Files matching the pattern 00_*R
contain functions used by other files. Figures are in the ./figs
directory.
Due to file size limitations on Github, the files in ./data and are
not uploaded to this repository. Data urls are located in
./code/00_parameters.R and will be downloaded when running
./code/01_download_data.R unless otherwise noted. All data necessary
to run these analyses can be found in this
data repository. Note that the
data repository automatically changes the extension for some files to
the .tab format. All files with the .tab format should be renamed to
have the .csv extension, which reflects their original extension when
downloaded from their original urls.
- Elizabeth T. Chin
- Daniel E. Ho
- Benjamin Q. Huynh
- Mathew V. Kiang
- Allison Koenecke
- Derek Ouyang
- David H Rehkopf
We use renv, but below we
also include the relevant information to ensure reproducibility.
> sessioninfo::session_info(pkgs = "attached")
─ Session info ─────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
setting value
version R version 4.2.3 (2023-03-15)
os macOS Ventura 13.2.1
system x86_64, darwin22.3.0
ui RStudio
language (EN)
collate en_US.UTF-8
ctype en_US.UTF-8
date 2023-04-12
rstudio 2023.03.0+386 Cherry Blossom (desktop)
pandoc 2.19.2 @ /Applications/RStudio.app/Contents/Resources/app/quarto/bin/tools/ (via rmarkdown)
─ Packages ─────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
package * version date (UTC) lib source
AER * 1.2-10 2022-06-14 [?] CRAN (R 4.2.3)
broom * 1.0.4 2023-03-11 [?] CRAN (R 4.2.3)
car * 3.1-2 2023-03-30 [?] CRAN (R 4.2.3)
carData * 3.0-5 2022-01-06 [?] CRAN (R 4.2.3)
caret * 6.0-94 2023-03-21 [?] CRAN (R 4.2.3)
CBPS * 0.23 2022-01-18 [?] CRAN (R 4.2.3)
censusapi * 0.8.0 2022-08-09 [?] CRAN (R 4.2.3)
cobalt * 4.5.0 2023-03-22 [?] CRAN (R 4.2.3)
corrplot * 0.92 2021-11-18 [?] CRAN (R 4.2.3)
cowplot * 1.1.1 2020-12-30 [?] CRAN (R 4.2.3)
data.table * 1.14.8 2023-02-17 [?] CRAN (R 4.2.3)
dfoptim * 2020.10-1 2020-10-20 [?] CRAN (R 4.2.3)
downloader * 0.4 2015-07-09 [?] CRAN (R 4.2.3)
dplyr * 1.1.1 2023-03-22 [?] CRAN (R 4.2.3)
forcats * 1.0.0 2023-01-29 [?] CRAN (R 4.2.3)
Formula * 1.2-5 2023-02-24 [?] CRAN (R 4.2.3)
ggalluvial * 0.12.5 2023-02-22 [?] CRAN (R 4.2.3)
ggdensity * 1.0.0 2023-02-09 [?] CRAN (R 4.2.3)
ggplot2 * 3.4.2 2023-04-03 [?] CRAN (R 4.2.3)
ggpmisc * 0.5.2 2022-12-17 [?] CRAN (R 4.2.3)
ggpp * 0.5.1 2023-02-03 [?] CRAN (R 4.2.3)
ggpubr * 0.6.0 2023-02-10 [?] CRAN (R 4.2.3)
glmnet * 4.1-7 2023-03-23 [?] CRAN (R 4.2.3)
grf * 2.2.1 2022-12-14 [?] CRAN (R 4.2.3)
here * 1.0.1 2020-12-13 [?] CRAN (R 4.2.3)
lattice * 0.20-45 2021-09-22 [?] CRAN (R 4.2.3)
lmtest * 0.9-40 2022-03-21 [?] CRAN (R 4.2.3)
lqr * 5.0 2022-08-15 [?] CRAN (R 4.2.3)
lubridate * 1.9.2 2023-02-10 [?] CRAN (R 4.2.3)
MASS * 7.3-58.2 2023-01-23 [?] CRAN (R 4.2.3)
MatchIt * 4.5.2 2023-03-22 [?] CRAN (R 4.2.3)
Matrix * 1.5-3 2022-11-11 [?] CRAN (R 4.2.3)
matrixStats * 0.63.0 2022-11-18 [?] CRAN (R 4.2.3)
mgcv * 1.8-42 2023-03-02 [?] CRAN (R 4.2.3)
mice * 3.15.0 2022-11-19 [?] CRAN (R 4.2.3)
nlme * 3.1-162 2023-01-31 [?] CRAN (R 4.2.3)
nnet * 7.3-18 2022-09-28 [?] CRAN (R 4.2.3)
nortest * 1.0-4 2015-07-30 [?] CRAN (R 4.2.3)
np * 0.60-17 2023-03-13 [?] CRAN (R 4.2.3)
numDeriv * 2016.8-1.1 2019-06-06 [?] CRAN (R 4.2.3)
optimx * 2022-4.30 2022-05-10 [?] CRAN (R 4.2.3)
pbapply * 1.7-0 2023-01-13 [?] CRAN (R 4.2.3)
pROC * 1.18.0 2021-09-03 [?] CRAN (R 4.2.3)
purrr * 1.0.1 2023-01-10 [?] CRAN (R 4.2.3)
qgam * 1.3.4 2021-11-22 [?] CRAN (R 4.2.3)
rankdist * 1.1.4 2019-07-27 [?] CRAN (R 4.2.3)
rdd * 0.57 2016-03-14 [?] CRAN (R 4.2.3)
rddtools * 1.6.0 2022-01-10 [?] CRAN (R 4.2.3)
readr * 2.1.4 2023-02-10 [?] CRAN (R 4.2.3)
readxl * 1.4.2 2023-02-09 [?] CRAN (R 4.2.3)
sandwich * 3.0-2 2022-06-15 [?] CRAN (R 4.2.3)
scales * 1.2.1 2022-08-20 [?] CRAN (R 4.2.3)
stringr * 1.5.0 2022-12-02 [?] CRAN (R 4.2.3)
summarytools * 1.0.1 2022-05-20 [?] CRAN (R 4.2.3)
survival * 3.5-3 2023-02-12 [?] CRAN (R 4.2.3)
testthat * 3.1.7 2023-03-12 [?] CRAN (R 4.2.3)
tibble * 3.2.1 2023-03-20 [?] CRAN (R 4.2.3)
tidycensus * 1.3.2 2023-01-30 [?] CRAN (R 4.2.3)
tidyr * 1.3.0 2023-01-24 [?] CRAN (R 4.2.3)
tidyverse * 2.0.0 2023-02-22 [?] CRAN (R 4.2.3)
tigris * 2.0.1 2023-01-30 [?] CRAN (R 4.2.3)
treemapify * 2.5.5 2021-01-08 [?] CRAN (R 4.2.3)
wesanderson * 0.3.6 2018-04-20 [?] CRAN (R 4.2.3)
zoo * 1.8-11 2022-09-17 [?] CRAN (R 4.2.3)