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Showing results

Supplementary files for my book, "Bioinformatics Data Skills"

Python 712 377 Updated Oct 15, 2018

Latex code for making neural networks diagrams

TeX 24,495 3,048 Updated Aug 21, 2023

Inferring CNV from Single-Cell RNA-Seq

R 658 176 Updated Nov 14, 2025

Fast and accurate de novo assembler for long reads

C 398 55 Updated May 10, 2024

Dirichlet Process based methods for subclonal reconstruction of tumours

R 32 19 Updated Feb 18, 2026

Redbean: A fuzzy Bruijn graph approach to long noisy reads assembly

C 531 93 Updated Sep 27, 2023

Ultra-fast de novo assembler using long noisy reads

C 1 Updated Feb 19, 2018

PRML algorithms implemented in Python

Jupyter Notebook 1 Updated Jan 27, 2019

Fuzzy String Matching in Python

Python 9,265 869 Updated Feb 24, 2023

Learning the Sequence Alignment/Map format

Perl 112 22 Updated Aug 4, 2025

An r package for generating beautiful and customizable heatmaps

R 237 30 Updated Sep 7, 2020