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Create minimal docker images from conda environments

Python 61 10 Updated Aug 15, 2023

A framework for training graph neural networks to untangle assembly graphs obtained from OLC-based de novo genome assemblers.

Python 51 7 Updated Dec 9, 2025

Random scripts, mostly for dealing with RADseq data and DNA sequence alignments

Perl 18 4 Updated Oct 2, 2025

Scripts used in the study "Seascape genomics and mitogenomic phylogeography of the sailfish (Istiophorus platypterus)" - https://doi.org/10.1093/gbe/evad042

R 2 Updated Mar 23, 2023

A public repo for code and analyses associated with the paper Tracking the Global Footprint of Fisheries

Jupyter Notebook 52 22 Updated Feb 26, 2021

Normalized difference vegetation index improved

Python 2 Updated Feb 22, 2019

Script to download data of vegetation index data from MODIS

R 1 Updated Jul 6, 2020

An R package to support analyses with Geneland

HTML 1 Updated Dec 6, 2019

Tutorial for performing redundancy analysis

R 15 6 Updated Oct 21, 2020

Course materials for Kieran Healy's rstudio::conf 2020 data visualization workshop

85 60 Updated Feb 20, 2020

SNP-ML is A machine learning dependent tool for SNP calling in polyploidy organisms

6 5 Updated Apr 2, 2020

❗ This is a read-only mirror of the CRAN R package repository. fishtree — Interface to the Fish Tree of Life API. Homepage: https://fishtreeoflife.org/, https://github.com/jonchang/fishtree Report …

R 2 Updated Feb 3, 2021