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A library for creating complex UpSet plots with ggplot2 geoms

Jupyter Notebook 549 38 Updated Sep 23, 2025

A guided, intuitive introduction to genomics for software engineers. Curated by the community.

JavaScript 389 37 Updated Aug 25, 2024

Data compilation, analysis, and visualization scripts for the manuscript "Clonal architecture predicts clinical outcomes and drug sensitivity in acute myeloid leukemia"

R 4 1 Updated Nov 3, 2021

resources for faculty

219 28 Updated Jan 8, 2023

Implementation of FACETS for Terra

WDL 12 3 Updated Jan 20, 2023

An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.

R 72 19 Updated May 23, 2024

A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic mutations

R 35 11 Updated Jan 28, 2022

pyJASPAR: A Pythonic interface to JASPAR transcription factor motifs

Python 34 3 Updated Oct 23, 2025

👾 Register tool using versioned containers.

Python 6 Updated Feb 1, 2026

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

3,645 1,071 Updated Feb 2, 2026

A Twitter development application that retweets and likes tweets containing particular PhD/ECR/Academic related content. Made to facilitate 'early career' awareness, communication, friendship, and …

Python 5 4 Updated Nov 15, 2020

Browser extension for accessing open data resources in the biomedical domain

JavaScript 11 4 Updated Jan 8, 2023

Conda recipes for the bioconda channel.

Shell 1,778 3,730 Updated Feb 3, 2026

Variant Assurance Pipeline

Perl 5 3 Updated Oct 13, 2023

😎 Awesome lists about all kinds of interesting topics

434,623 33,057 Updated Jan 28, 2026

📝 An awesome Data Science repository to learn and apply for real world problems.

28,243 6,362 Updated Jan 30, 2026

Mapping, filtering, and data hub visualisation pipeline for DNase, ATAC, ChIP data

Shell 10 2 Updated Dec 23, 2019

CRUK Bioinformatics Workshop September 2017

HTML 18 14 Updated Sep 21, 2017

Laravel 12 with user authentication, registration with email confirmation, social media authentication, password recovery, and captcha protection. Uses offical [Bootstrap 4](http://getbootstrap.com…

JavaScript 3,054 990 Updated Jan 19, 2026

Themes for Bootstrap

JavaScript 14,768 3,660 Updated Dec 6, 2025

TimelineJS v3: A Storytelling Timeline built in JavaScript. http://timeline.knightlab.com

JavaScript 3,158 642 Updated Dec 1, 2025

Interactive Differential Expression AnaLysis - DE made accessible and reproducible

R 31 8 Updated Dec 1, 2025

Cleaning up Conda r-packages

Python 50 35 Updated Jan 6, 2026

Publication-quality sequence logos in R

R 226 32 Updated Oct 13, 2024

A framework to make it easy for developers to add product tours to their pages.

JavaScript 4,183 650 Updated Nov 8, 2021
Rich Text Format 84 21 Updated Feb 3, 2021

A django version of basic configuration to develop a mentoring application

Python 2 Updated Apr 19, 2017

HTML5 scrollable genome browser

JavaScript 111 45 Updated Oct 17, 2023

An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..

R 818 162 Updated Aug 4, 2024

Machine learning dashboard created with R/shiny

R 81 52 Updated Nov 2, 2021
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