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aakilkhanemon/README.md

Hi there 👋, My name is Aakil Khan Emon (My friends call me Aakil)

(https://camo.githubusercontent.com/8afc935b0681bfa9fe3848d6864f58926f20c4bc20a474b36b1db85711710d48/68747470733a2f2f6d656469612d657870312e6c6963646e2e636f6d2f646d732f696d6167652f43353632324151456949423339464e657630512f6665656473686172652d736872696e6b5f3830302f302f313634373438383534393937363f653d3136353034393932303026763d6265746126743d425667547045377a326f532d396655356b6b317a5f4d595f3376347575446f5936714546587157436e6851)

Hi there! 👋

I am an Erasmus Mundus Master's Scholar specializing in Bioinformatics, Immunoinformatics, Cheminformatics and AI-driven Drug Discovery.

Coming from a background in Biotechnology & Genetic Engineering, I am now bridging the gap between advanced dry lab biology and computational solutions in Europe. My focus is on leveraging artificial intelligence (AI) and structural biology to tackle Infectious Diseases.

🔭 Research Focus

  • AI in Healthcare: Applying Deep Learning for de novo drug design.
  • Structural Biology: Utilization of AlphaFold and molecular dynamics for target identification.
  • Immunoinformatics: Epitope prediction and subunit and mRNA vaccine design.

🛠 Computational Stack

Programming & Scripting Python R Bash C++

Bioinformatics & Cheminformatics Tools

  • Docking & Dynamics: AutoDock Vina, PyRx, Gaussian, Desmond, Maestro
  • Visualization: PyMol, Discovery Studio, UCSF Chimera.
  • Pathway Analysis: Reactome, MetaboAnalyst.

🌱 Current Learning

I am currently deepening my expertise in Linux-based HPC workflows and integrating AlphaFold predictions into high-throughput docking pipelines.

💞️ Collaboration

I am open to collaborations on projects regarding advanced QSAR modeling, virtual screening, or open-source bioinformatics tool development.

github linkedin twitter orcid publons

     

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