Computational Pathology Toolbox developed by TIA Lab
Please try
python -m tiatoolbox -h
First, install OpenSlide here. Then, create and activate the conda environment:
pip install -r requirements.txt
conda env create --name tiatoolbox --file requirements.conda.yml
conda activate tiatoolbox
usage: tiatoolbox [-h] [--version] [--verbose VERBOSE]
{read-region,
save-tiles,
slide_info,
slide-thumbnail,
}
...
positional arguments:
{slide_info}
read-region usage: tiatoolbox read-region -h
save-tiles usage: tiatoolbox save-tiles -h
slide-info usage: tiatoolbox slide-info -h
slide-thumbnail usage: tiatoolbox slide-thumbnail -h
optional arguments:
-h, --help show this help message and exit
--version show program`s version number and exit
--verbose VERBOSE
