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Phylogenetic orthology inference for comparative genomics
A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies like GTDB/ICTV
BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a focus on handling genome assembly data.
A list of interesting genome browser and genome visualization programs
Detecting multi-genome synteny using minimizer graph mapping
Free ChatGPT&DeepSeek API Key，免费ChatGPT&DeepSeek API。免费接入DeepSeek API和GPT4 API，支持 gpt | deepseek | claude | gemini | grok 等排名靠前的常用大模型。
A web-based tool for creating customized visualizations of genomic neighborhoods for use in publications
Using ggtree to build phylogenetic trees
Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the …
AutoGPT is the vision of accessible AI for everyone, to use and to build on. Our mission is to provide the tools, so that you can focus on what matters.
Helper Library for Blinka to allow creating I2C and SPI busio objects by passing in the Bus ID
GitHub Repository to accompany my YouTube series of videos on Introductory Data Science using R.
📊 Path to a free self-taught education in Data Science!
Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes
a Bioinformatics Application for Navigating De novo Assembly Graphs Easily
MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis
The second version of the Kraken taxonomic sequence classification system
Biopython: Work with biological sequence data in Python
Scripts to offload and remotely basecall fast5 files from an Oxford Nanopore MinION run
Python tutorials in both Jupyter Notebook and youtube format.