GitHub - RuhuaJiang/leamapping: [Ongoing] Long and high Error rate reads Alignment (LEA)

RuhuaJiang / leamapping Public

[Ongoing] Long and high Error rate reads Alignment (LEA)

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Name		Name	Last commit message	Last commit date
Latest commit History 24 Commits
bntseq.c		bntseq.c
bntseq.h		bntseq.h
human_g1k_v37_chr20_2000000_3000000.fasta		human_g1k_v37_chr20_2000000_3000000.fasta
human_g1k_v37_chr20_200000_210000.fasta		human_g1k_v37_chr20_200000_210000.fasta
human_g1k_v37_chr20_200000_210000_e0_N400.bwa.read1.fastq		human_g1k_v37_chr20_200000_210000_e0_N400.bwa.read1.fastq
human_g1k_v37_chr20_200000_210000_e10_N400.bwa.read1.fastq		human_g1k_v37_chr20_200000_210000_e10_N400.bwa.read1.fastq
human_g1k_v37_chr20_200000_210000_e20_N400.bwa.read1.fastq		human_g1k_v37_chr20_200000_210000_e20_N400.bwa.read1.fastq
kseq.h		kseq.h
lea_aln.cc		lea_aln.cc
lea_aln.h		lea_aln.h
lea_index.cc		lea_index.cc
lea_index.h		lea_index.h
lea_index_reglen.cc		lea_index_reglen.cc
lea_index_reglen.h		lea_index_reglen.h
lea_seqio.cc		lea_seqio.cc
lea_seqio.h		lea_seqio.h
lea_types.h		lea_types.h
lea_utility.cc		lea_utility.cc
lea_utility.h		lea_utility.h
main.cc		main.cc
pacbio_April2014_depth2_chr20_2000000_3000000_0001.fastq		pacbio_April2014_depth2_chr20_2000000_3000000_0001.fastq
reads_human_g1k_v37_chr20_200000_210000_20fold.fq		reads_human_g1k_v37_chr20_200000_210000_20fold.fq
utils.c		utils.c
utils.h		utils.h