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This repo contains the scripts for a summer project led by Jonathan Johnson, which aims to compare the eQTL difference between the TOB and BioHeart cohorts.

Python 1 Updated Feb 6, 2026

Biomni: a general-purpose biomedical AI agent

Python 2,633 458 Updated Feb 9, 2026
Python 5 Updated Feb 12, 2026

Long-read RNA transcriptome of human and mouse oocytes

R 3 Updated Feb 4, 2026

Visualize 3D ST data in Jupyter

JavaScript 12 Updated Feb 6, 2026

Pangenome-Informed Genome Assembly (PIGA) workflow for population-scale diploid genome assembly

Python 18 Updated Feb 11, 2026

Extension library for HypothesisTests.jl

Julia 2 Updated Jan 24, 2026

Learn Julia via interactive tutorials!

Jupyter Notebook 1,349 665 Updated Jul 5, 2024

The Julia Programming Language

Julia 48,349 5,735 Updated Feb 12, 2026

Code repository for "Protein-Metabolite Association Studies Identify Novel Proteomic Determinants of Metabolite Levels in Human Plasma"

Julia 7 2 Updated Nov 14, 2025

SMR-Portal: an online platform for integrative analysis of GWAS and xQTL data to identify complex trait genes.

Vue 21 4 Updated Dec 2, 2025

Genetic Associations to Mechanisms and Medicine Analysis.

R 9 Updated Jan 21, 2026

Genome-wide Complex Trait Bayesian analysis

C++ 2 1 Updated Dec 12, 2025

OPERA (omics pleiotropic association) is a Bayesian generalization of the SMR & HEIDI approach8 to a multi-omics model, where the molecular phenotypes are considered as exposures and only the compl…

C++ 2 Updated Sep 26, 2024
Vue 2 Updated Feb 11, 2026

REVIGO (REduce + VIsualize Gene Ontology) Core library

C# 12 2 Updated Sep 23, 2025
R 6 6 Updated Sep 12, 2019
R 6 1 Updated Nov 17, 2019

identifying disease critical cell types and programs from single cell RNAseq

Jupyter Notebook 58 4 Updated May 30, 2022

Obtain trait-relevant cell subpopulations by incorporating pathway activity transformed scRNA-seq data with GWAS data

R 66 16 Updated Nov 23, 2025

Nano Banana Pro 全网最全提示词整理

HTML 624 73 Updated Dec 27, 2025

Adobe illustrator 科研组图插件,支持复制粘贴相对位置、图片一键自动排列,一键添加子图label | Adobe Illustrator plugin, specifically designed for scientific illustration, supports copy-pasting with relative positioning, batch settin…

JavaScript 228 7 Updated Jan 26, 2026

PPT plugin, supports one-click to add image titles, copy and paste positions, one-click image alignment, and one-click to insert Markdown (including bold, hyperlinks, and other inline styles, as we…

C# 2,210 78 Updated Jan 18, 2026

RStudio is an integrated development environment (IDE) for R

Java 4,949 1,156 Updated Feb 13, 2026

A Tool for low Coverage HiFi Data Assembly

Python 38 2 Updated Dec 27, 2025

所有小初高、大学PDF教材。

Roff 65,053 14,505 Updated Oct 18, 2025

README文件语法解读,即Github Flavored Markdown语法介绍

7,037 7,175 Updated Nov 24, 2025
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