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  1. Genomics-analysis-scripts Genomics-analysis-scripts Public

    This repository contains a collection of genomics-related scripts that I personally use. The scripts are somewhat disorganized but serve various purposes for genomic analysis. They are a work in pr…

    Python 1

  2. Chloroplast_Script Chloroplast_Script Public

    Python implementation of processing chloroplast genome

    Perl 2

  3. orthology_phylogeny_pipeline orthology_phylogeny_pipeline Public

    Pipeline script to run orthology analysis and phylogenetic tree construction

    Python 5

  4. Repeat-Annotation-pipeline Repeat-Annotation-pipeline Public

    TE_Annotation_Pipeline.py is an integrated pipeline that annotates Transposable Elements (TEs) in a given genome sequence.nnotation workflows.

    Python 2