nfcoremodulesbioc
affy_justrma
affy_justrma
ascat
ascat
deseq2_differential
deseq2_differential
anota2seq_anota2seqrun
anota2seq_anota2seqrun
dupradar
dupradar
geoquery_getgeo
geoquery_getgeo
hasheddrops
hasheddrops
homer_annotatepeaks
homer_annotatepeaks
homer_findpeaks
homer_findpeaks
homer_maketagdirectory
homer_maketagdirectory
homer_makeucscfile
homer_makeucscfile
homer_pos2bed
homer_pos2bed
limma_differential
limma_differential
propr_grea
propr_grea
propr_propd
propr_propd
proteus_readproteingroups
proteus_readproteingroups
purecn_coverage
purecn_coverage
Calculate intervals coverage for each sample. N.B. the tool can not handle staging files with symlinks, stageInMode should be set to 'link'.
purecn_intervalfile
purecn_intervalfile
purecn_normaldb
purecn_normaldb
purecn_run
purecn_run
ribowaltz
ribowaltz
rtn_tni
rtn_tni
scds
scds
scramble_clusteranalysis
scramble_clusteranalysis
scramble_clusteridentifier
scramble_clusteridentifier
sparsesignatures
sparsesignatures
summarizedexperiment_summarizedexperiment
summarizedexperiment_summarizedexperiment
tinc
tinc
tximeta_tximport
tximeta_tximport
variancepartition_dream
variancepartition_dream
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