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Commits on May 1, 2025

• multi-gpu inference. Adds 'batch index' to the resulting prediction (#854)

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  skothenhill-nv

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Commits on Apr 30, 2025

• Bump to version 2.6 (#852)

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  trvachov

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Commits on Apr 29, 2025

• Release notes v2.6 (#849)

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  trvachov

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  pstjohn

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Commits on Apr 25, 2025

• Docs fix (#826)

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  trvachov

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  lvojtku

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  effc955

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• h11 CRIT vuln fix (#847)

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  trvachov

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• Pbinder/esm2 document (#846)

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  polinabinder1

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• Pbinder/auto resume (#766)

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  polinabinder1

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Commits on Apr 24, 2025

• fix geneformer image links (#844)

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  jomitchellnv

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Commits on Apr 22, 2025

• fix geneformer image paths (#839)

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  jomitchellnv

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• Add pre commit to verify test status (#841)

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  pstjohn

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Commits on Apr 21, 2025

• Updates docs for geneformer training, inference, and cellxclassification (#823)

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  jomitchellnv

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Commits on Apr 17, 2025

• Adding baseline metrics for benchmarking ESM2 model (#831)

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  ShevaNguyen

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  dorotat-nv

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• Remove temporary pins in docs build (#828)

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  pstjohn

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Commits on Apr 15, 2025

• updated configs for benchmarks (#833)

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  dorotat-nv

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Commits on Apr 14, 2025

• Fixes for AMPLIFY QA scripts (#825)

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  pstjohn

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  trvachov

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Commits on Apr 11, 2025

• Fix bitsandbytes issue on ARM (#824)

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  trvachov

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• unify the implementation of early training termination across BioNeMo subpackages and update benchmarks (#803)

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  dorotat-nv

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• Biopharma mailing list docs addition. (#822)

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  trvachov

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Commits on Apr 10, 2025

• [cye/rapids-sc-install] Add rapids_singlecell import to BioNeMo FW container image. (#816)

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  cspades

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  f320920

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• Pbinder/geneformer partial conv (#802)

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  polinabinder1

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• Bump crossbeam-channel from 0.5.13 to 0.5.15 in /sub-packages/bionemo-noodles (#818)

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  dependabot[bot]

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  7effb47

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• Bump rust from 1.82.0 to 1.86.0 (#819)

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  dependabot[bot]

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• Remove import guard in bionemo-llm (#804)

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  pstjohn

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  04d23fb

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• Add AMPLIFY model documentation, minor type fixes (#788)

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  pstjohn

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• Add .codecov.yml status checks (#618)

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  pstjohn

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  4bda5fa

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• Have dependabot update our docker base image (#813)

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  pstjohn

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  21c9141

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Commits on Apr 9, 2025

• Update README.md link (#812)

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  nvdreidenbach

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  21186ad

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• [cye/ml-subpackage-ci] Onboard bionemo-llm and bionemo-noodles to the sub-package CI. (#809)

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  cspades

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  skothenhill-nv

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Commits on Apr 4, 2025

• Fix ARM docker build (#801)

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  trvachov

  authored
  a643d8c

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• Add local clone script (#787)

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  nvdreidenbach

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Commits on Apr 3, 2025

• Bump 3rdparty/NeMo from `cc8ff45` to `384ff02` (#792)

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  dependabot[bot]

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• Remove llama-index from container to fix CVEs (#800)

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  trvachov

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  0870c40

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Commits on Apr 2, 2025

• Dockerfile improvements for ARM (#777)

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  trvachov

  authored
  b7d073b

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• [cye/subpack-gpu-testing] Add GPU runner to testing job. (#776)

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  cspades

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  ee42211

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Commits on Apr 1, 2025

• Revert commit 67a869b3c601096475b82c1da1d2339d860dbce1 (TE_VERSION=v1.13 fix) (#795)

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  dorotat-nv

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  1a7497a

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