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Commits on Apr 19, 2018

• removed useless elif

  klugem

  committed
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Commits on Apr 6, 2018

• allow to shorten reads from beginning and end

  klugem

  committed
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Commits on Mar 29, 2018

• Install pytest-timeout also on Travis

  marcelm

  committed
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• Avoid infinite loop when using --no-trim and --info-file

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  marcelm

  committed
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• Test for issue #296

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  marcelm

  committed
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Commits on Mar 28, 2018

• Print quality-trimming statistics also for --nextseq-trim

  marcelm

  committed
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Commits on Mar 18, 2018

• Close sys.stdin before assigning to it

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  marcelm

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Commits on Mar 17, 2018

• Create an issue template

  marcelm

  committed
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Commits on Feb 21, 2018

• Install sphinx_issues into docs testenv

  marcelm

  committed
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• changelog

  marcelm

  committed
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• Changelog

  marcelm

  committed
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• Use sphinx_issues extension for linking to issues

  marcelm

  committed
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• It’s 2018

  marcelm

  committed
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Commits on Feb 20, 2018

• The last R2 chunk could be incomplete when splitting paired-end FASTQ

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  marcelm

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Commits on Feb 13, 2018

• Switch to pytest even in documentation

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  marcelm

  committed
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Commits on Jan 11, 2018

• Use separate modifier objects for R1 and R2

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  marcelm

  committed
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Commits on Dec 7, 2017

• pytest 3.3 dropped support for Python 3.3, but we still do

  marcelm

  committed
  531312d

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• Clarify

  marcelm

  committed
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Commits on Dec 4, 2017

• Print which options are not supported in multi-core

  marcelm

  committed
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Commits on Nov 23, 2017

• Require the most recent xopen

  marcelm

  committed
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• Version 1.15

  marcelm

  committed
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Commits on Nov 22, 2017

• Add some comments

  marcelm

  committed
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Commits on Nov 20, 2017

• Add forgotten test files

  marcelm

  committed
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• Make --discard-untrimmed work with non-anchored linked adapters

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  marcelm

  committed
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Commits on Nov 19, 2017

• Changelog

  marcelm

  committed
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• Switch to --cores=1 as default for now

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  marcelm

  committed
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Commits on Nov 18, 2017

• Throw an error if FASTA/FASTQ input buffer is too small

  marcelm

  committed
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• PEP8

  marcelm

  committed
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Commits on Nov 17, 2017

• Add a multi-core section to the documentation

  marcelm

  committed
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• html_use_smartypants is deprecated

  marcelm

  committed
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• Support reading from stdin even when running on multiple cores

  marcelm

  committed
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• Refactor seqio.open a bit

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  marcelm

  committed
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Commits on Nov 15, 2017

• Depend on xopen 0.3.0, which is faster on Python 3

  marcelm

  committed
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Commits on Nov 13, 2017

• Multi-core works with paired-end data

  marcelm

  committed
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• Test doc building from tox

  marcelm

  committed
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