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Commits on Mar 25, 2019

• Fixed edge-case bug of tree comprising a single cluster of identical sequences (produced bad Newick format)

  

  Kevin Howe

  committed
  3260fa6

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Commits on Aug 28, 2018

• Allow for null-terminator in long names (reported by Torsten Seemann)

  

  Kevin Howe

  committed
  e6b8be9

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Commits on Mar 20, 2018

• Updated version

  

  Kevin Howe

  committed
  047463f

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• Deal properly with lower-triangualar matrices

  

  Kevin Howe

  committed
  99d45da

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Commits on Nov 1, 2017

• Updated version

  

  Kevin Howe

  committed
  45bebdb

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• Create LICENSE

  

  Kevin Howe

  authored
  4279f52

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Commits on Oct 10, 2017

• Merge pull request #3 from muffato/master

  Show description for 3b3991e
  

  Kevin Howe

  authored
  3b3991e

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• bugfix: allow empty lines in the Stockholm file

  muffato

  committed
  fee7d4c

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Commits on Apr 10, 2017

• Merge pull request #1 from tseemann/master

  Show description for 7a9141d
  

  Kevin Howe

  authored
  7a9141d

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Commits on Apr 9, 2017

• Add -v flag to print version

  tseemann

  committed
  f3102e4

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Commits on Mar 10, 2017

• Updated README

  

  Kevin Howe

  committed
  6003647

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• Markdown

  

  Kevin Howe

  committed
  d1eb114

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• Paranoid checking return status of fscanf

  

  Kevin Howe

  committed
  fa5caf7

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• Standardize on gcc

  

  Kevin Howe

  committed
  69ba612

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• Added Apache 2.0 licence

  

  klh

  committed
  957fedb

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Commits on Aug 14, 2009

• Show description for 6a3b80d
  

  klh

  committed
  6a3b80d

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Commits on Jun 17, 2009

• Made "PHYLIP" format fot distance matrix files less strict

  

  klh

  committed
  8fa620c

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• Made "PHYLIP: format for distance matrix less strict

  

  klh

  committed
  bb01b54

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• Show description for bb03347
  

  klh

  committed
  bb03347

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Commits on Apr 20, 2006

• Tightened the Stockholm parser slightly so that it does not happily

  Show description for 089710b
  

  klh

  committed
  089710b

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Commits on Mar 17, 2006

• Applies a patch by Dmitry Samborsky that writes out identical members of

  Show description for 320d835
  

  klh

  committed
  320d835

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• Included a patch from Dmitry Samborsky that writes out a cluster of

  Show description for 2b9111e
  

  klh

  committed
  2b9111e

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• Typos

  

  klh

  committed
  7227650

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Commits on Jun 29, 2005

• Update to Stockhom parser: line reading is now done into an expandable

  Show description for cb46bbf
  

  klh

  committed
  cb46bbf

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• Corrected speelnif mistake in error message

  

  klh

  committed
  3409f2a

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Commits on Mar 16, 2004

• Created general "Distance" type so that it is easier to flip between

  Show description for 404fc3e
  

  klh

  committed
  404fc3e

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• 1. Fixed bug in UPGMA algorithm relating to the update of the distance

  Show description for e1273a7
  

  klh

  committed
  e1273a7

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Commits on Feb 4, 2004

• Removed a piece of dead code in the UPGMA implementation which actually

  Show description for 72e3847
  

  klh

  committed
  72e3847

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Commits on Nov 18, 2003

• Removed unused variables (highlighted by Mac gcc)

  

  klh

  committed
  01ce414

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Commits on Dec 12, 2002

• Fixed a strage bug relating to bootstrapping in UPGMA

  

  klh

  committed
  c17a954

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Commits on Aug 28, 2002

• Changed doubles to floats to save on space

  

  klh

  committed
  eb7500d

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• Recoded part of UPGMA to be faster (idea by Alex Bateman)

  

  klh

  committed
  44be917

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Commits on Jul 9, 2002

• Added a new line to the usage string

  

  klh

  committed
  5354eac

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Commits on May 17, 2002

• Typo from last check-in

  

  klh

  committed
  daf96d3

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• Added some more information

  

  klh

  committed
  42df022

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