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Commits on Jan 6, 2025

• Merge pull request #212 from HelikarLab/dependabot/github_actions/astral-sh/setup-uv-5

  JoshLoecker

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• chore(deps): bump astral-sh/setup-uv from 4 to 5

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  dependabot[bot]

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• chore(deps): bump astral-sh/ruff-action from 2 to 3 (#213)

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  dependabot[bot]

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Commits on Dec 13, 2024

• Revert mistaken merge (#209)

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  JoshLoecker

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Commits on Dec 11, 2024

• Merge pull request #203 from HelikarLab/hotfix

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  JoshLoecker

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• chore: bump version

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  JoshLoecker

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  6c08b7b

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• Merge pull request #200 from HelikarLab/dependabot/github_actions/astral-sh/setup-uv-4

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  JoshLoecker

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• Merge pull request #201 from HelikarLab/dependabot/github_actions/astral-sh/ruff-action-2

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  JoshLoecker

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• Merge pull request #202 from HelikarLab/fix/troppo-cobamp-requirement

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  JoshLoecker

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• chore: fix typo

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  JoshLoecker

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• chore: remove print

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  JoshLoecker

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  157f2e5

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• fix: solver must be uppercase

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  JoshLoecker

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• chore: reset troppo branch

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  JoshLoecker

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  091f4bc

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• fix: use correct branch for cobamp

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  JoshLoecker

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  0a0ac4d

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• fix: use proper installation for troppo/cobamp

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  JoshLoecker

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• refactor: install troppo/cobamp from github

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  JoshLoecker

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• fix: install from branch

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  JoshLoecker

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• fix: temporarily install troppo from develop

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  JoshLoecker

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• fix: provide solver to imat build function

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  JoshLoecker

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• feat: set troppo solver

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  JoshLoecker

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  b2a6e0f

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• revert: install troppo and cobamp from modified repo

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  JoshLoecker

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• revert: require troppo and cobamp

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  JoshLoecker

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• chore: bump version

  JoshLoecker

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  4a33180

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• chore: bump version

  JoshLoecker

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Commits on Dec 10, 2024

• refactor: remove troppo and cobamp for CC testing

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  JoshLoecker

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  322f948

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• fix: set cobra solver earlier

  JoshLoecker

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• fix: set solver using cobra configuration

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  JoshLoecker

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• chore(deps): bump astral-sh/ruff-action from 1 to 2

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  dependabot[bot]

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  db6e683

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• chore(deps): bump astral-sh/setup-uv from 3 to 4

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  dependabot[bot]

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Commits on Dec 9, 2024

• Merge pull request #198 from HelikarLab/hotfix

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  JoshLoecker

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• Merge branch 'main' into hotfix

  JoshLoecker

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• fix: match new column names

  JoshLoecker

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  a0754d6

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• fix: use better column names

  JoshLoecker

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• Merge pull request #197 from HelikarLab/hotfix

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  JoshLoecker

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• feat: write zFPKM graphs

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  JoshLoecker

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