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base repository: ljwharbers/nextflow-gpseq
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head repository: BiCroLab/nextflow-gpseq
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- 15 commits
- 7 files changed
- 2 contributors
Commits on May 5, 2025
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(1) bugfix: removed extra space in .bed.gz files, found in addition to the intended tab spacers; (2) replaced "FS" with "," in awk for readability
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Update export_output in gpseq-radical.R
(1) removed "+" symbols from output file names; (2) fix to avoid scientific notation in coordinates; (3) removed headers from output files; (4) minor readability changes
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fix: script won't crash if output folder already exists
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input colnames are now assigned within this code, rather than by previous steps of the pipeline (hence they won't be required as headers in ".bed.gz" files)
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process EXTRACT: barcode length is now automatically inferred from input samplesheet, allowing different lengths (if present)
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Commits on Aug 4, 2025
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